HumanMetagenomeDB

Explore and download curated human metagenomes metadata

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Citing HumanMetagenomeDB

Kasmanas, J. C., Bartholomäus, A., Corrêa, F. B., Tal, T., Jehmlich, N., Herberth, G., von Bergen, M., Stadler, P. F., de Carvalho, A. & da Rocha, U. N. (2021). HumanMetagenomeDB: a public repository of curated and standardized metadata for human metagenomes. Nucleic Acids Research, 49(D1), D743–D750.

Database Version

Release 1.1 (June 2020) - 69,822 human metagenomes

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Number of sequences (millions)

Latitudinal range (Degrees)

Longitudinal range (Degrees)

Host Age (years)

Host body mass index (kg/m²)

Host height (m)

Host weight (kg)

Sequencing data attributes

Number of basepairs (millions)

Quality Above 30 (%) (SRA)

Creation Date

Mean Phred Quality (SRA)

Average length of sequences (bp)

Drisee Score Raw (MG-RAST)

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Quick filters

Number of sequences (millions)

Host Age (years)

Host body mass index (kg/m²)

Host height (m)

Host weight (kg)

Sequencing data attributes

Number of basepairs (millions)

Quality Above 30 (%) (SRA)

Creation Date

Mean Phred Quality (SRA)

Average length of sequences (bp)

Drisee Score Raw (MG-RAST)

Display all available columns.

Go to page:

Drag the horizontal scroll bar to view all the columns.